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细胞色素c序列查找和分析

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2024年3月14日发(作者:勇嘉澍)

细胞色素c序列查找和分析

1 登陆NCBI网站,查找关于细胞色素C相关的蛋白的序列,选

取了human,rat,yeast,drosophila等14个物种的细胞色素C蛋白序

列,制订成表格,如下:

NO.

1

ACC NO Organism

AAA28437 fruit fly

Protein sequences

2 AAA21711 Rattus

norvegicus

3 Homo sapiens Homo sapiens

4 P00006 Bos taurus

5 CAA25046 Gallus gallus

6 S11172 yeast

7 AAC80552 Tigriopus

californicus

8 CCSF s tarfish

9 CCCA common carp

1 mgvpagdvek gkklfvqrca qchtveaggk

hkvgpnlhgl igrktgqaag faytdankak

gitwnedtlf eylenpkkyi pgtkmifagl

kkpnergdli aylksatk

1 mgdvekgkki fvqkcaqcht vekggkhktg

pnlhglfgrk tgqaagfsyt danknkgitw

gedtlmeyle npkkyipgtk mifagikkkg

eradliaylk katne

1 mgdvekgkki fimkcsqcht vekggkhktg

pnlhglfgrk tgqapgysyt aanknkgiiw

gedtlmeyle npkkyipgtk mifvgikkke

eradliaylk katne

1 gdvekgkkif vqkcaqchtv ekggkhktgp

nlhglfgrkt gqapgfsytd anknkgitwg

eetlmeylen pkkyipgtkm ifagikkkge

redliaylkk atne

1 mgdiekgkki fvqkcsqcht vekggkhktg

pnlhglfgrk tgqaegfsyt danknkgitw

gedtlmeyle npkkyipgtk mifagikkks

ervdliaylk datsk

1 mpyapgdekk gaslfktrca qchtvekgga

nkvgpnlhgv fgrktgqaeg fsyteanrdk

gitwdeetlf aylenpkkyi pgtkmafagf

kkpadrnnvi tylkkatse

1 mgdidkgkki fvqkctqcht ieaggkhkvg

pnlhgmygrq tgkaagysyt dankskgvtw

neetldiylt npkkyipgtk mvfaglkkkg

dredliaylk sasss

1 gqvekgkkif vqrcaqchtv ekagkhktgp

nlngilgrkt gqaagfsytd anrnkgitwk

netlfeylen pkkyipgtkm vfaglkkqke

rqdliaylea atk

1 gdvekgkkvf vqkcaqchtv zbggkhkvgp

nlwglfgrkt gqapgfsytb abkskgivwb

zztlmeylzb pkkyipgtkm ifagikkkge

10 CCHOZ common zebra

11 AAL67777 Actinobacillus

lignieresii

12 CCHOD donkey

13 AAB86817 Pichia stipitis

14 CAA25899 Mus musculus

radliaylks ats

1 gdvekgkkif vqkcaqchtv ekggkhktgp

nlhglfgrkt gqapgfsytd anknkgitwk

eetlmeylen pkkyipgtkm ifagikkkte

redliaylkk atne

1 mtkllqkiaf ilplvfslva xaemvdtfqf

qnetdrvrav alakslrcpq cqnqnlvesn

attayklrle vyemvnqgkt deeiikimte

rfghfvnykp pfna

1 gdvekgkkif vqkcaqchtv ekggkhktgp

nlhglfgrkt gqapgfsytd anknkgitwk

eetlmeylen pkkyipgtkm ifagikkkte

redliaylkk atne

1 mpapfekgse kkgatlfktr clqchtveeg

gphkvgpnlh gimgrksgqa vgysytdank

kkgvewseqtmsdylenpkkyipgtkmafg

glkkpkdrnd lvtylasatk

1 mgdvekgkki fvqkcaqcht vekggkhktg

pnlhglfgrk tgqaagfsyt danknkgitw

gedtlmeyle npkkyipgtk mifagikkkg

eradliaylk katne

2 将所查找的序列作成fasta格式的文本文档。

3 选取第二条序列(

AAA21711

)为代表,进行蛋白质一级,二级,

三级结构的预测

a.一级结构用的是

/tools/,结果如下:

User-provided sequence:

1 11 21 31 41 51

| | | | | |

1 MGDVEKGKKI FIMKCSQCHT VEKGGKHKTG PNLHGLFGRK TGQAPGYSYT AANKNKGIIW

60

61 GEDTLMEYLE NPKKYIPGTK MIFVGIKKKE ERADLIAYLK KATNE

References and documentation are available.

2024年3月14日发(作者:勇嘉澍)

细胞色素c序列查找和分析

1 登陆NCBI网站,查找关于细胞色素C相关的蛋白的序列,选

取了human,rat,yeast,drosophila等14个物种的细胞色素C蛋白序

列,制订成表格,如下:

NO.

1

ACC NO Organism

AAA28437 fruit fly

Protein sequences

2 AAA21711 Rattus

norvegicus

3 Homo sapiens Homo sapiens

4 P00006 Bos taurus

5 CAA25046 Gallus gallus

6 S11172 yeast

7 AAC80552 Tigriopus

californicus

8 CCSF s tarfish

9 CCCA common carp

1 mgvpagdvek gkklfvqrca qchtveaggk

hkvgpnlhgl igrktgqaag faytdankak

gitwnedtlf eylenpkkyi pgtkmifagl

kkpnergdli aylksatk

1 mgdvekgkki fvqkcaqcht vekggkhktg

pnlhglfgrk tgqaagfsyt danknkgitw

gedtlmeyle npkkyipgtk mifagikkkg

eradliaylk katne

1 mgdvekgkki fimkcsqcht vekggkhktg

pnlhglfgrk tgqapgysyt aanknkgiiw

gedtlmeyle npkkyipgtk mifvgikkke

eradliaylk katne

1 gdvekgkkif vqkcaqchtv ekggkhktgp

nlhglfgrkt gqapgfsytd anknkgitwg

eetlmeylen pkkyipgtkm ifagikkkge

redliaylkk atne

1 mgdiekgkki fvqkcsqcht vekggkhktg

pnlhglfgrk tgqaegfsyt danknkgitw

gedtlmeyle npkkyipgtk mifagikkks

ervdliaylk datsk

1 mpyapgdekk gaslfktrca qchtvekgga

nkvgpnlhgv fgrktgqaeg fsyteanrdk

gitwdeetlf aylenpkkyi pgtkmafagf

kkpadrnnvi tylkkatse

1 mgdidkgkki fvqkctqcht ieaggkhkvg

pnlhgmygrq tgkaagysyt dankskgvtw

neetldiylt npkkyipgtk mvfaglkkkg

dredliaylk sasss

1 gqvekgkkif vqrcaqchtv ekagkhktgp

nlngilgrkt gqaagfsytd anrnkgitwk

netlfeylen pkkyipgtkm vfaglkkqke

rqdliaylea atk

1 gdvekgkkvf vqkcaqchtv zbggkhkvgp

nlwglfgrkt gqapgfsytb abkskgivwb

zztlmeylzb pkkyipgtkm ifagikkkge

10 CCHOZ common zebra

11 AAL67777 Actinobacillus

lignieresii

12 CCHOD donkey

13 AAB86817 Pichia stipitis

14 CAA25899 Mus musculus

radliaylks ats

1 gdvekgkkif vqkcaqchtv ekggkhktgp

nlhglfgrkt gqapgfsytd anknkgitwk

eetlmeylen pkkyipgtkm ifagikkkte

redliaylkk atne

1 mtkllqkiaf ilplvfslva xaemvdtfqf

qnetdrvrav alakslrcpq cqnqnlvesn

attayklrle vyemvnqgkt deeiikimte

rfghfvnykp pfna

1 gdvekgkkif vqkcaqchtv ekggkhktgp

nlhglfgrkt gqapgfsytd anknkgitwk

eetlmeylen pkkyipgtkm ifagikkkte

redliaylkk atne

1 mpapfekgse kkgatlfktr clqchtveeg

gphkvgpnlh gimgrksgqa vgysytdank

kkgvewseqtmsdylenpkkyipgtkmafg

glkkpkdrnd lvtylasatk

1 mgdvekgkki fvqkcaqcht vekggkhktg

pnlhglfgrk tgqaagfsyt danknkgitw

gedtlmeyle npkkyipgtk mifagikkkg

eradliaylk katne

2 将所查找的序列作成fasta格式的文本文档。

3 选取第二条序列(

AAA21711

)为代表,进行蛋白质一级,二级,

三级结构的预测

a.一级结构用的是

/tools/,结果如下:

User-provided sequence:

1 11 21 31 41 51

| | | | | |

1 MGDVEKGKKI FIMKCSQCHT VEKGGKHKTG PNLHGLFGRK TGQAPGYSYT AANKNKGIIW

60

61 GEDTLMEYLE NPKKYIPGTK MIFVGIKKKE ERADLIAYLK KATNE

References and documentation are available.

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